Publications

Selected publications

  1. Zhihui Luo*, Xinping Fan*, Yao Su, Yu S Huang# (2018) Accurity: accurate tumor purity and ploidy inference from tumor-normal WGS data by jointly modelling somatic copy number alterations and heterozygous germline single-nucleotide-variants. Bioinformatics (* equal contribution)

  2. 黄宇,罗志辉,苏瑶,范新平(2017) 用于计算癌症样本纯度和染色体倍性的方法和装置  (专利)

  3. Hannes Svardal, Anna J Jasinska, Cristian Apetrei, Giovanni Coppola, Yu Huang, et al., Magnus Nordborg (2017) Ancient hybridization and strong adaptation to viruses across African vervet monkey populations. Nature Genetics 49, 1705–1713 (2017)
  4. YS Huang, V Ramensky, et al., Nelson Freimer (2015) Sequencing strategies and characterization of 721 vervet monkey genomes for future genetic analyses of medically relevant traits. BMC Biology (http://www.biomedcentral.com/1741-7007/13/41/abstract )   
  5. MW Horton, AM Hancock*, YS Huang*, C Toomajian*, S Atwell, A Auton, NW Muliyati, A Platt, FG Sperone, BJ Vilhjálmsson, M Nordborg, JO Borevitz, J Bergelson (2012): Genome-wide patterns of genetic variation in worldwide Arabidopsis thalianaaccessions from the RegMap panel. Nature Genetics 116 citations.  
  6. YS Huang#, M Horton, BJ Vilhjálmsson, Ü Seren, D Meng, C Meyer, MA Amer, JO Borevitz, J Bergelson, M Nordborg (2011): Analysis and visualization of Arabidopsis thaliana GWAS using web 2.0 technologies. http://arabidopsis.usc.edu/ Database 2011; (#: corresponding author) 9 citations.  
  7. S Atwell*, YS Huang*, BJ Vilhjálmsson*, G Willems*, M Horton, Y Li, D Meng, A Platt, A Tarone, TT. Hu, R Jiang, NW Muliyati, X Zhang, MAi Amer, I Baxter, B Brachi, J Chory, C Dean, M Debieu, J de Meaux, JR Ecker, N Faure, JM Kniskern, JD Jones, T Michael, A Nemri, F Roux, DE Salt, C Tang, M Todesco, MB Traw, D Weigel, P Marjoram, JO Borevitz, J Bergelson, M Nordborg (2010): Genome-wide association study of 107 phenotypes in a common set of Arabidopsis thaliana inbred lines. Nature (*: equal contribution.)  577 citations.  
  8. A Platt, M Horton*, YS Huang*, Y Li*, A Anastasio, NW Mulyati, J Ågren, O Bossdorf, D Byers, K Donohue, M Dunning, E Holub, A Hudson, V Le Corre, O Loudet, F Roux, N Warthmann, D Weigel, L Rivero, R Scholl, M Nordborg, J Bergelson, JO. Borevitz (2010): The Scale of Population Structure in Arabidopsis thaliana. Plos Genetics (*: equal contribution.) 144 citations.  
  9. Y Huang*, H Li*, H Hu, X Yan, MS. Waterman, H Huang and XJ Zhou (2007): Systematic discovery of functional modules and context-specific functional annotation of human genome. Bioinformatics (ISMB 2007) 23:i222-229. (*: equal contribution.) 62 citations. 

For full publications, please check my Google scholar profile.